BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A04LP1|AL425310
(383 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1773 714 0.0
3x_Contig1807 347 8e-96
3x_Contig486 315 4e-86
3x_Contig1796 229 4e-60
3x_Contig1614 169 5e-42
>3x_Contig1773
Length = 8694
Score = 714 bits (356), Expect = 0.0
Identities = 372/382 (97%)
Strand = Plus / Plus
Query: 1 gatcattgctgaatacaagggtccccccttgtaattrgatgcmctttcctgaattcacgt 60
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1961 gatcattgctgaatacaagggtccccccttgtaattggatgccctttcctgaattcacgt 2020
Query: 61 gacttattcaamcattttcattttcatttttmaccacgatcaatcaawamwcgtgaataa 120
|||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 2021 gactgattcaaccattttcattttcatttttcaccacgatcaatcaatcctcgtgaatca 2080
Query: 121 tctcctgaacttattcacgtgataaccagaggaagtgtttttcattttcatacttcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 tctcctgaacttattcacgtgataaccagaggaagtgtttttcattttcatacttcctgt 2140
Query: 181 ccatcatccctccatagagaggacctctccctctgtgaatagaatacgcttctccataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 ccatcatccctccatagagaggacctctccctctgtgaatagaatacgcttctccataca 2200
Query: 241 cgtgaccaccgcaaacactctactaacaactatctctcgtgaatcatctcctgaactgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 cgtgaccaccgcaaacactctactaacaactatctctcgtgaatcatctcctgaactgtg 2260
Query: 301 aactatgaactgcctattcaatgtatactgctactctactgtttatatcaattgctcgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2261 aactatgaactgcctattcaatgtatactgctactctactgtttatatcaattgctcgtc 2320
Query: 361 tattcctctctctccctctcct 382
||||||||||||||||||||||
Sbjct: 2321 tattcctctctctccctctcct 2342
>3x_Contig1807
Length = 66587
Score = 347 bits (173), Expect = 8e-96
Identities = 182/185 (98%)
Strand = Plus / Plus
Query: 198 agaggacctctccctctgtgaatagaatacgcttctccatacacgtgaccaccgcaaaca 257
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2241 agaggagctctccccctgtgaatagaatacgcttctccatacacgtgaccaccgcaaaca 2300
Query: 258 ctctactaacaactatctctcgtgaatcatctcctgaactgtgaactatgaactgcctat 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 ctctactaacaactatctctcgtgaatcatctcctgaactgtgaactatgaactgcctat 2360
Query: 318 tcaatgtatactgctactctactgtttatatcaattgctcgtctattcctctctctccct 377
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2361 tcaatgtatactgctactctactgtttatatcaattgctcgtctatccctctctctccct 2420
Query: 378 ctcct 382
|||||
Sbjct: 2421 ctcct 2425
Score = 339 bits (169), Expect = 2e-93
Identities = 185/195 (94%)
Strand = Plus / Plus
Query: 1 gatcattgctgaatacaagggtccccccttgtaattrgatgcmctttcctgaattcacgt 60
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2031 gatcattgctgaatacaagggtccccccttgtaattggatgccctttcctgaattcacgt 2090
Query: 61 gacttattcaamcattttcattttcatttttmaccacgatcaatcaawamwcgtgaataa 120
|||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 2091 gactgattcaaccattttcattttcatttttcaccacgatcaatcaatcctcgtgaatca 2150
Query: 121 tctcctgaacttattcacgtgataaccagaggaagtgtttttcattttcatacttcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2151 tctcctgaacttattcacgtgataaccagaggaagtgtttttcattttcatacttcctgt 2210
Query: 181 ccatcatccctccat 195
|||||||||||||||
Sbjct: 2211 ccatcatccctccat 2225
>3x_Contig486
Length = 1939
Score = 315 bits (157), Expect = 4e-86
Identities = 183/195 (93%), Gaps = 1/195 (0%)
Strand = Plus / Plus
Query: 1 gatcattgctgaatacaagggtccccccttgtaattrgatgcmctttcctgaattcacgt 60
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 1647 gatcattgctgaatacaagggtccccc-ttgtaattggatgccctttcctgaatacacgt 1705
Query: 61 gacttattcaamcattttcattttcatttttmaccacgatcaatcaawamwcgtgaataa 120
|||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 1706 gactgattcaaccattttcattttcatttttcaccacgatcaatcaatcctcgtgaatca 1765
Query: 121 tctcctgaacttattcacgtgataaccagaggaagtgtttttcattttcatacttcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 tctcctgaacttattcacgtgataaccagaggaagtgtttttcattttcatacttcctgt 1825
Query: 181 ccatcatccctccat 195
|||||||||||||||
Sbjct: 1826 ccatcatccctccat 1840
Score = 114 bits (57), Expect = 1e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 198 agaggacctctccctctgtgaatagaatacgcttctccatacacgtgaccaccgcaaaca 257
|||||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 1857 agaggagctctccccctgtgaatagaatacgcttcttcatacacgtgaccactgcaaaca 1916
Query: 258 ctctactaacaactatc 274
|||||||||||| ||||
Sbjct: 1917 ctctactaacaaatatc 1933
>3x_Contig1796
Length = 24558
Score = 229 bits (114), Expect = 4e-60
Identities = 195/220 (88%), Gaps = 4/220 (1%)
Strand = Plus / Plus
Query: 112 cgtgaataatctcctgaacttattcacgtgataaccagaggaagtgtttttcattttcat 171
||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 1973 cgtgaatcatcccctgaacttattcacgtgataaacagaggaagtatttttcattttcat 2032
Query: 172 acttcctgtccatcatccctccatagagaggacctctccctctgtgaatagaatacgctt 231
||| |||||||||||||||| | | |||||||||||||| |||||||||||||||||||
Sbjct: 2033 actctctgtccatcatccctc-acatagaggacctctccccctgtgaatagaatacgctt 2091
Query: 232 ctccatacacgtgaccaccgcaaacactctactaacaactatctctcgtgaatcatctcc 291
||||||||||||||||||||||||||||||| |||||| |||| || || ||| |
Sbjct: 2092 ctccatacacgtgaccaccgcaaacactctagtaacaaatatcccttgt---acatggct 2148
Query: 292 tgaactgtgaactatgaactgcctattcaatgtatactgc 331
|||||| ||||||| ||||| ||||||| |||||||||||
Sbjct: 2149 tgaactatgaactacgaacttcctattcgatgtatactgc 2188
>3x_Contig1614
Length = 4869
Score = 169 bits (84), Expect = 5e-42
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 88 ttttmaccacgatcaatcaawamwcgtgaataatctcctgaacttattcacgtgataacc 147
|||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || |
Sbjct: 1939 ttttcaccacgatcaatcaatcctcgtgaatcatctcctgaacttattcacgtgacaaac 1998
Query: 148 agaggaagtgtttttcattttcatacttcctgtccatcatccctccat 195
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1999 agaggaagtgtttttcattttcatacttcctgtccatcatccctccat 2046
Score = 120 bits (60), Expect = 2e-27
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 213 ctgtgaatagaatacgcttctccatacacgtgaccaccgcaaacactctactaacaacta 272
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2072 ctgtgaatagaatacgcttctccatacacgtgaccacggcaaacactctactaacaacta 2131
Query: 273 tctctcgt 280
|| |||||
Sbjct: 2132 tccctcgt 2139
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2662
Number of Sequences: 1807
Number of extensions: 2662
Number of successful extensions: 125
Number of sequences better than 1.0e-20: 5
length of query: 383
length of database: 10,358,551
effective HSP length: 15
effective length of query: 368
effective length of database: 10,331,446
effective search space: 3801972128
effective search space used: 3801972128
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.8 bits)